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The role of σ1 length and flexibility in reovirus replication

dc.creatorBokiej, Magdalena
dc.date.accessioned2020-08-22T20:46:25Z
dc.date.available2012-08-21
dc.date.issued2012-08-21
dc.identifier.urihttps://etd.library.vanderbilt.edu/etd-08132012-112658
dc.identifier.urihttp://hdl.handle.net/1803/13890
dc.description.abstractThis dissertation research was focused on elucidating mechanisms at the reovirus-host interface that allow successful completion of the initial replicative steps and lead to viral protein synthesis. During the course of the study, I discovered new functional domains in the reovirus attachment protein σ1. Sigma 1 is an elongated trimer with head-and-tail morphology that engages cell-surface carbohydrate and junctional adhesion molecule-A (JAM-A). This protein is comprised of three domains partitioned by two flexible linkers termed inter-domain regions (IDRs). To determine the importance of σ1 length and flexibility at different stages of reovirus infection, I generated viruses with mutant σ1 molecules of altered length and flexibility and tested these viruses for the capacity to bind the cell surface, internalize, uncoat, induce protein synthesis, assemble, and replicate. I reduced the length of the α-helical σ1 tail to engineer mutants L1 and L2 and deleted midpoint and head-proximal σ1 IDRs to generate ∆IDR1 and ∆IDR2, respectively. Decreasing length or flexibility of σ1 resulted in delayed reovirus infection and reduced viral titers. L1, L2, and ∆IDR1 but not ∆IDR2 displayed reduced cell attachment, but altering σ1 length or flexibility did not diminish the efficiency of virion internalization. Replication of ∆IDR2 was hindered at a post-disassembly step. Differences between wild-type and σ1 mutant viruses were not attributable to alterations in σ1 folding, as determined by experiments assessing engagement of cell-surface carbohydrate and JAM-A by the L and IDR viruses. However, ∆IDR1 harbored substantially less σ1 on the outer capsid. Taken together, these findings suggest that σ1 length is required for reovirus binding to cells. In contrast, IDR1 is required for stable σ1 encapsidation, and IDR2 is required for a post-uncoating replication step. Thus, I discovered that σ1 functions are not restricted to mediating reovirus attachment.
dc.format.mimetypeapplication/pdf
dc.subjectreovirus
dc.subjectattachment
dc.subjectsigma1
dc.subjectinternalization
dc.subjectdisassembly
dc.subjectescape
dc.subjectassembly
dc.titleThe role of σ1 length and flexibility in reovirus replication
dc.typedissertation
dc.contributor.committeeMemberBenjamin Spiller
dc.contributor.committeeMemberJens Meiler
dc.contributor.committeeMemberTerence S. Dermody
dc.contributor.committeeMemberJohn V. Williams
dc.type.materialtext
thesis.degree.namePHD
thesis.degree.leveldissertation
thesis.degree.disciplineMicrobiology and Immunology
thesis.degree.grantorVanderbilt University
local.embargo.terms2012-08-21
local.embargo.lift2012-08-21
dc.contributor.committeeChairEarl Ruley


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